Sarah Auburn

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Sarah Auburn

Menzies School of Health Research

 https://orcid.org/0000-0002-4638-536X
20082023

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  • Pf7: An open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples

    Abdel Hamid, M. M., Abdelraheem, M. H., Acheampong, D. O., Ahouidi, A., Ali, M., Almagro-Garcia, J., Amambua-Ngwa, A., Amaratunga, C., Amenga-Etego, L., Andagalu, B., Anderson, T., Andrianaranjaka, V., Aniebo, I., Aninagyei, E., Ansah, F., Ansah, P. O., Apinjoh, T., Arnaldo, P., Ashley, E., Auburn, S., & 152 othersAwandare, G. A., Ba, H., Baraka, V., Barry, A., Bejon, P., Bertin, G. I., Boni, M. F., Borrmann, S., Bousema, T., Bouyou-Akotet, M., Branch, O., Bull, P. C., Cheah, H., Chindavongsa, K., Chookajorn, T., Chotivanich, K., Claessens, A., Conway, D. J., Corredor, V., Courtier, E., Craig, A., D'Alessandro, U., Dama, S., Day, N., Denis, B., Dhorda, M., Diakite, M., Djimde, A., Dolecek, C., Dondorp, A., Doumbia, S., Drakeley, C., Drury, E., Duffy, P., Echeverry, D. F., Egwang, T. G., Enosse, S. M. M., Erko, B., Fairhurst, R. M., Faiz, A., Fanello, C. A., Fleharty, M., Forbes, M., Fukuda, M., Gamboa, D., Ghansah, A., Golassa, L., Goncalves, S., Harrison, G. L. A., Healy, S. A., Hendry, J. A., Hernandez-Koutoucheva, A., Hien, T. T., Hill, C. A., Hombhanje, F., Hott, A., Htut, Y., Hussein, M., Imwong, M., Ishengoma, D., Jackson, S. A., Jacob, C. G., Jeans, J., Johnson, K. J., Kamaliddin, C., Kamau, E., Keatley, J., Kochakarn, T., Konate, D. S., Konaté, A., Kone, A., Kwiatkowski, D. P., Kyaw, M. P., Kyle, D., Lawniczak, M., Lee, S. K., Lemnge, M., Lim, P., Lon, C., Loua, K. M., Mandara, C. I., Marfurt, J., Marsh, K., Maude, R. J., Mayxay, M., Maïga-Ascofaré, O., Miotto, O., Mita, T., Mobegi, V., Mohamed, A. O., Mokuolu, O. A., Montgomery, J., Morang’a, C. M., Mueller, I., Murie, K., Newton, P. N., Ngo Duc, T., Nguyen, T. N., Nguyen, T. N., Nguyen Thi Kim, T., Nguyen Van, H., Noedl, H., Nosten, F., Noviyanti, R., Ntui, V. N. N., Nzila, A., Ochola-Oyier, L. I., Ocholla, H., Oduro, A., Omedo, I., Onyamboko, M. A., Ouedraogo, J. B., Oyebola, K., Oyibo, W. A., Pearson, R., Peshu, N., Phyo, A. P., Plowe, C. V., Price, R. N., Pukrittayakamee, S., Quang, H. H., Randrianarivelojosia, M., Rayner, J. C., Ringwald, P., Rosanas-Urgell, A., Rovira-Vallbona, E., Ruano-Rubio, V., Ruiz, L., Saunders, D., Shayo, A., Siba, P., Simpson, V. J., Sissoko, M. S., Smith, C., Su, X. Z., Sutherland, C., Takala-Harrison, S., Talman, A., Tavul, L., Thanh, N. V., Thathy, V., Thu, A. M., Toure, M., Tshefu, A., Verra, F., Vinetz, J., Wellems, T. E., Wendler, J., White, N. J., Whitton, G., Yavo, W. & van der Pluijm, R. W., 2023, In: Wellcome Open Research. 8, 22.

    Research output: Contribution to journal › Article › peer-review

    Open Access
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    5 Downloads (Pure)

  • A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria

    Trimarsanto, H., Amato, R., Pearson, R. D., Sutanto, E., Noviyanti, R., Trianty, L., Marfurt, J., Pava, Z., Echeverry, D. F., Lopera-Mesa, T. M., Montenegro, L. M., Tobón-Castaño, A., Grigg, M. J., Barber, B., William, T., Anstey, N. M., Getachew, S., Petros, B., Aseffa, A., Assefa, A., & 42 othersRahim, A. G., Chau, N. H., Hien, T. T., Alam, M. S., Khan, W. A., Ley, B., Thriemer, K., Wangchuck, S., Hamedi, Y., Adam, I., Liu, Y., Gao, Q., Sriprawat, K., Ferreira, M. U., Laman, M., Barry, A., Mueller, I., Lacerda, M. V. G., Llanos-Cuentas, A., Krudsood, S., Lon, C., Mohammed, R., Yilma, D., Pereira, D. B., Espino, F. E. J., Chu, C. S., Vélez, I. D., Namaik-larp, C., Villegas, M. F., Green, J. A., Koh, G., Rayner, J. C., Drury, E., Gonçalves, S., Simpson, V., Miotto, O., Miles, A., White, N. J., Nosten, F., Kwiatkowski, D. P., Price, R. N. & Auburn, S., 23 Dec 2022, In: Communications Biology. 5, 1, p. 1-10 10 p., 1411.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
    3 Downloads (Pure)

  • An open dataset of Plasmodium vivax genome variation in 1,895 worldwide samples

    MalariaGEN, Adam, I., Alam, M. S., Alemu, S., Amaratunga, C., Amato, R., Andrianaranjaka, V., Anstey, N. M., Aseffa, A., Ashley, E., Assefa, A., Auburn, S., Barber, B. E., Barry, A., Batista Pereira, D., Cao, J., Chau, N. H., Chotivanich, K., Chu, C., Dondorp, A. M., & 59 othersDrury, E., Echeverry, D. F., Erko, B., Espino, F., Fairhurst, R., Faiz, A., Fernanda Villegas, M., Gao, Q., Golassa, L., Goncalves, S., Grigg, M. J., Hamedi, Y., Hien, T. T., Htut, Y., Johnson, K. J., Karunaweera, N., Khan, W., Krudsood, S., Kwiatkowski, D. P., Lacerda, M., Ley, B., Lim, P., Liu, Y., Llanos-Cuentas, A., Lon, C., Lopera-Mesa, T., Marfurt, J., Michon, P., Miotto, O., Mohammed, R., Mueller, I., Namaik-larp, C., Newton, P. N., Nguyen, T. N., Nosten, F., Noviyanti, R., Pava, Z., Pearson, R. D., Petros, B., Phyo, A. P., Price, R. N., Pukrittayakamee, S., Rahim, A. G., Randrianarivelojosia, M., Rayner, J. C., Rumaseb, A., Siegel, S. V., Simpson, V. J., Thriemer, K., Tobon-Castano, A., Trimarsanto, H., Urbano Ferreira, M., Vélez, I. D., Wangchuk, S., Wellems, T. E., White, N. J., William, T., Yasnot, M. F. & Yilma, D., 2022, In: Wellcome Open Research. 7, p. 1-22 22 p., 136.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
    3 Downloads (Pure)

  • Geographical distribution and genetic diversity of Plasmodium vivax reticulocyte binding protein 1a correlates with patient antigenicity

    Park, J. H., Kim, M. H., Sutanto, E., Na, S. W., Kim, M. J., Yeom, J. S., Nyunt, M. H., Abbas Elfaki, M. M., Abdel Hamid, M. M., Cha, S. H., Alemu, S. G., Sriprawat, K., Anstey, N. M., Grigg, M. J., Barber, B. E., William, T., Gao, Q., Liu, Y., Pearson, R. D., Price, R. N., & 7 othersNosten, F., Yoon, S. I., No, J. H., Han, E. T., Auburn, S., Russell, B. & Han, J. H., 1 Jun 2022, In: PLoS Neglected Tropical Diseases. 16, 6, p. 1-18 18 p., e0010492.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
    11 Downloads (Pure)

  • Novel highly-multiplexed AmpliSeq targeted assay for Plasmodium vivax genetic surveillance use cases at multiple geographical scales

    Kattenberg, J. H., Nguyen, H. V., Nguyen, H. L., Sauve, E., Nguyen, N. T. H., Chopo-Pizarro, A., Trimarsanto, H., Monsieurs, P., Guetens, P., Nguyen, X. X., Esbroeck, M. V., Auburn, S., Nguyen, B. T. H. & Rosanas-Urgell, A., 11 Aug 2022, In: Frontiers in Cellular and Infection Microbiology. 12, p. 1-24 24 p., 953187.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
    10 Downloads (Pure)
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