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2019
3 Downloads (Pure)

A cluster of melioidosis infections in hatchling saltwater crocodiles (Crocodylus porosus) resolved using genome-wide comparison of a common north Australian strain of Burkholderia pseudomallei

Rachlin, A., Kleinecke, M., Kaestli, M., Mayo, M., Webb, J. R., Rigas, V., Shilton, C., Benedict, S., Dyrting, K. & Currie, B. J., 21 Aug 2019, In : Microbial Genomics. 5, 8, p. 1-11 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Melioidosis
Burkholderia pseudomallei
Alligators and Crocodiles
Genome
Infection
2 Downloads (Pure)

Disease Exposure and Antifungal Bacteria on Skin of Invasive Cane Toads, Australia

Weitzman, C. L., Kaestli, M., Gibb, K., Brown, G. P., Shine, R. & Christian, K., Sep 2019, In : Emerging Infectious Diseases. 25, 9, p. 1770-1771 2 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Canes
Anura
Bacteria
Skin
Chytridiomycota

Melioidosis fatalities in captive slender-tailed meerkats (Suricata suricatta): Combining epidemiology, pathology and whole-genome sequencing supports variable mechanisms of transmission with one health implications

Rachlin, A., Shilton, C., Webb, J. R., Mayo, M., Kaestli, M., Kleinecke, M., Rigas, V., Benedict, S., Gurry, I. & Currie, B. J., 19 Dec 2019, In : BMC Veterinary Research. 15, p. 1-12 12 p., 458.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Melioidosis
Burkholderia pseudomallei
epidemiology
Epidemiology
Genome

Microbial diversity and distribution differ between water column and biofilm assemblages in arid-land waterbodies

Kaestli, M., Munksgaard, N., Gibb, K. & Davis, J., Dec 2019, In : Freshwater Science. 38, 4, p. 869-882 14 p.

Research output: Contribution to journalArticleResearchpeer-review

arid lands
biofilm
water column
groundwater
water

New Pond-Indicator bacteria to complement routine monitoring in a Wet/Dry Tropical wastewater stabilization system

Rose, A., Padovan, A., Christian, K., Kaestli, M., McGuinness, K., Tsoukalis, S. & Gibb, K., 19 Nov 2019, In : Water (Switzerland). 11, 11, p. 1-22 22 p., 2422.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
system stabilization
Ponds
Waste Water
indicator species
wastewater
56 Downloads (Pure)

Opportunistic pathogens and large microbial diversity detected in source-to-distribution drinking water of three remote communities in Northern Australia

Kaestli, M., O'Donnell, M., Rose, A. M., Webb, J., Mayo, M., Currie, B. & Gibb, K., 5 Sep 2019, In : PLoS Neglected Tropical Diseases. 13, 9, p. 1-23 23 p., e0007672.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Drinking Water
Burkholderia pseudomallei
Iron
Gallionellaceae
Water Supply

Sources and drivers of contamination along an urban tropical river (Ciliwung, Indonesia): Insights from microbial DNA, isotopes and water chemistry

Duvert, C., Priadi, C. R., Rose, A. M., Abdillah, A., Marthanty, D. R., Gibb, K. S. & Kaestli, M., 10 Sep 2019, In : Science of the Total Environment. 682, September, p. 382-393 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Isotopes
water chemistry
Contamination
DNA
Rivers
5 Downloads (Pure)

Tracing the environmental footprint of the Burkholderia pseudomallei lipopolysaccharide genotypes in the tropical “Top End” of the Northern Territory, Australia

Webb, J. R., Rachlin, A., Rigas, V., Sarovich, D. S., Price, E. P., Kaestli, M., Ward, L. M., Mayo, M. & Currie, B. J., 26 Jul 2019, In : PLoS Neglected Tropical Diseases. 13, 7, p. 1-15 15 p., e0007369.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Northern Territory
Burkholderia pseudomallei
Lipopolysaccharides
Genotype
Melioidosis

Wastewater nitrogen budgets can be resolved by complementary functional gene and physicochemical methods

Rose, A., Munksgaard, N., Kaestli, M., Bodrossy, L., van de Kamp, J., Tsoukalis, S. & Gibb, K., 1 Jun 2019, In : Journal of Water Process Engineering. 29, p. 1-10 10 p., 100802.

Research output: Contribution to journalArticleResearchpeer-review

Ponds
Budgets
Waste Water
Gas emissions
Wastewater

Whole-genome sequencing of Burkholderia pseudomallei from an urban melioidosis hot-spot reveals a fine-scale population structure and localised spatial clustering in the environment

Rachlin, A. N., Mayo, M., Webb, J., Kleinecke, M., Rigas, V., Harrington, G., Currie, B. & Kaestli, M., 17 Dec 2019, In : Scientific Reports.

Research output: Contribution to journalArticleResearchpeer-review

2018

Complete genome sequence of the environmental Burkholderia pseudomallei sequence type 131 isolate MSHR1435, associated with a chronic melioidosis infection

Sahl, J., Mayo, M., Price, E., Sarovich, D., Kaestli, M., Pearson, T., Williamson, C., Nottingham, R., Sheridan, K., Wagner, D., Currie, B. & Keim, P., Mar 2018, In : Genome. 6, 11, p. 1-2 2 p., e00072-18.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Burkholderia pseudomallei
Melioidosis
Ecology
Virulence
virulence

Developing quantitative PCR assays to target microbial nitrogen cycle genes: A new tool to monitor ecosystem function in sediment

Kaestli, M., Fortune, J. & Gibb, K., Mar 2018, Unknown. 52 p.

Research output: Book/ReportCommissioned reportResearchpeer-review

quantitative polymerase chain reaction
sediments
ecosystems
assays
genes
12 Downloads (Pure)

Differences in structure of northern Australian hypolithic communities according to location, rock type, and gross morphology

Guenther, S., Gibb, K., Rose, A. M., Kaestli, M. & Christian, K., 25 Jun 2018, In : AIMS Microbiology. 4, 3, p. 469-481 22 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
rock
nematode
cyanobacterium
prehnite
rainfall
6 Downloads (Pure)

Ecological patterns in the skin microbiota of frogs from tropical Australia

Christian, K., Weitzman, C., Rose, A., Kaestli, M. & Gibb, K., Nov 2018, In : Ecology and Evolution. 8, 21, p. 10510-10519 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
skin (animal)
frog
microbial communities
frogs
skin
2017

Burkholderia humptydooensis sp. nov., a new species related to Burkholderia thailandensis and the fifth member of the Burkholderia pseudomallei complex

Tuanyok, A., Mayo, M., Scholz, H., Hall, C. M., Allender, C. J., Kaestli, M., Ginther, J. L., Spring-Pearson, S., Bollig, M. C., Stone, J. K., Settles, E. W., Busch, J. D., Sidak-Loftis, L., Sahl, J. W., Thomas, A., Kreutzer, L., Georgi, E., Gee, J. E., Bowen, R. A., Ladner, J. T. & 6 others, Lovett, S., Koroleva, G., Palacios, G., Wagner, D. M., Currie, B. J. & Keim, P., 2017, In : Applied and Environmental Microbiology. 83, 5, p. 1-10 10 p., e02802-16.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Burkholderia thailandensis
Burkholderia pseudomallei
Burkholderia
genome
new species

Cadmium uptake and zinc-cadmium antagonism in Australian tropical rock oysters: Potential solutions for oyster aquaculture enterprises

Munksgaard, N., Burchert, S., Kaestli, M., Nowland, S., O'Connor, W. & Gibb, K. S., 2017, In : Marine Pollution Bulletin. 123, p. 45-56 12 p.

Research output: Contribution to journalArticleResearchpeer-review

oyster culture
Aquaculture
antagonism
Cadmium
oysters
18 Downloads (Pure)

Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis

Price, E. P., Sarovich, D. S., Webb, J. R., Hall, C. M., Jaramillo, S. A., Sahl, J. W., Kaestli, M., Mayo, M., Harrington, G., Baker, A. L., Sidak-Loftis, L. C., Settles, E. W., Lummis, M., Schupp, J. M., Gillece, J. D., Tuanyok, A., Warner, J., Busch, J. D., Keim, P., Currie, B. J. & 1 others, Wagner, D. M., 14 Sep 2017, In : PLoS Neglected Tropical Diseases. 11, 9, p. 1-18 18 p., e0005928.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
meropenem
Burkholderia pseudomallei
Burkholderia
Burkholderia cepacia complex
Burkholderia Infections
7 Downloads (Pure)

Spatial and temporal microbial patterns in a tropical macrotidal estuary subject to urbanization

Kaestli, M., Skillington, A., Kennedy, K., Majid, M., Williams, D., McGuinness, K., Munksgaard, N. & Gibb, K., 13 Jul 2017, In : Frontiers in Microbiology. 8, p. 1-14 14 p., 1313.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Estuaries
Urbanization
Microbiota
Water
Water Quality
4 Downloads (Pure)

Spatial patterns of hypolithic cyanobacterial diversity in Northern Australia

Christian, K., Kaestli, M. & Gibb, K., Sep 2017, In : Ecology and Evolution. 7, 17, p. 7023-7033 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
rocks
rock
community composition
transect
arid region
16 Downloads (Pure)

Suspected cases of intracontinental Burkholderia pseudomallei sequence type homoplasy resolved using whole-genome sequencing

Aziz, A., Sarovich, D., Harris, T., Kaestli, M., McRobb, E., Mayo, M., Currie, B. & PRICE, E., Nov 2017, In : Microbial Genomics. 3, 11, p. 1-8 8 p., 000139.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Burkholderia pseudomallei
Genome
Multilocus Sequence Typing
Melioidosis
Gram-Negative Bacteria
2016

Analysis of Faecal Indicators & Abiotic Water Parameters from upper Rapid Creek, Feb 2009 – Feb 2016

Kaestli, M. & Gibb, K., 30 May 2016, Darwin, Australia: Charles Darwin University. 11 p.

Research output: Book/ReportCommissioned reportResearch

Open Access
water
parameter
analysis
creek
indicator
Open Access
seafood
heavy metal
market
rock
food
6 Downloads (Pure)

Burkholderia pseudomallei Genotype Distribution in the Northern Territory, Australia

Chapple, S., Price, E., Sarovich, D., McRobb, E., Mayo, M., Kaestli, M., Spratt, B. & Currie, B., Jan 2016, In : American Journal of Tropical Medicine and Hygiene. 94, 1, p. 68-72 5 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
Northern Territory
Burkholderia pseudomallei
Genotype
Animal Migration
Melioidosis

Epidemiology: A global picture of melioidosis

Currie, B. J. & Kaestli, M., 20 Jan 2016, In : Nature. 529, 7586, p. 290-291 2 p.

Research output: Contribution to journalShort surveyResearchpeer-review

Open Access
Melioidosis
Epidemiology

Phylogenomic analysis reveals an Asian origin for African Burkholderia pseudomallei and further supports melioidosis endemicity in Africa

Sarovich, D., Garin, B., De Smet, B., Kaestli, M., Mayo, M., Vandamme, P., Jacobs, J., Lompo, P., Tahita, M., Tinto, H., Djaomalaza, I., Currie, B. & Price, E., 9 Mar 2016, In : mSphere. 1, 2, p. 1-12 12 p., e00089-15.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Melioidosis
Burkholderia pseudomallei
Madagascar
Southeastern Asia
Indian Ocean Islands

The association of melioidosis with climatic factors in Darwin, Australia: A 23-year time-series analysis

Kaestli, M., Grist, EPM., Ward, L., Hill, A., Mayo, M. & Currie, B., 2016, In : Journal of Infection. 72, 6, p. 687-697 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Melioidosis
Weather
Oceans and Seas
Burkholderia pseudomallei
Southeastern Asia

The melioidosis agent Burkholderia pseudomallei and related opportunistic pathogens detected in faecal matter of wildlife and livestock in northern Australia

Hoger, A., Mayo, M., Price, E., Rigas, V., Harrington, G., Machunter, B., Low Choy, J., Currie, B. & Kaestli, M., Jul 2016, In : Epidemiology and Infection. 144, 9, p. 1924-1932 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Melioidosis
Burkholderia pseudomallei
Livestock
Burkholderia
Macropodidae

The microbiota in bronchoalveolar lavage from young children with chronic lung disease includes taxa present in both the oropharynx and nasopharynx

Marsh, R. L., Kaestli, M., Chang, A. B., Binks, M. J., Pope, C. E., Hoffman, L. R. & Smith-Vaughan, H. C., 2016, In : Microbiome. 4, 37, p. 1-18 18 p., 37.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Oropharynx
Nasopharynx
Microbiota
Bronchoalveolar Lavage
Lung Diseases

Unprecedented melioidosis cases in northern Australia caused by an Asian Burkholderia pseudomallei strain identified by using large-scale comparative genomics

Price, E., Sarovich, D., Smith, E., Machunter, B., Harrington, G., Rigas, V., Hall, C., Hornstra, H., McRobb, E., Podin, Y., Mayo, M., Sahl, J., Wagner, D. M., Keim, P., Kaestli, M. & Currie, B., Feb 2016, In : Applied and Environmental Microbiology. 82, 3, p. 954-963 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Burkholderia pseudomallei
Melioidosis
Genomics
genomics
clone